Fitness data for HSERO_RS20325 in Herbaspirillum seropedicae SmR1
IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data)
Original annotation: imidazole glycerol phosphate synthase
SEED: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
KEGG: glutamine amidotransferase
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 4.5)
Or see all 244 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | D-Galacturonic Acid (C) | -5.6 | -7.3 | compare |
| supernatant | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X | -5.3 | -5.9 | compare |
| carbon source | L-Malic (C) | -5.1 | -6.0 | compare |
| carbon source | L-Fucose (C) | -5.0 | -5.5 | compare |
| carbon source | succinate (C) | -4.9 | -6.0 | compare |
| carbon source | Glycerol (C) | -4.9 | -4.9 | compare |
| carbon source | L-mannose (C) | -4.8 | -5.7 | compare |
| carbon source | L-Arabinose (C) | -4.8 | -4.7 | compare |
| carbon source | D,L-Lactate (C) | -4.8 | -6.0 | compare |
| nutrient | Min media with glucose | -4.8 | -6.3 | compare |
| nutrient | L-Serine | -4.8 | -5.1 | compare |
| plant | Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB | -4.8 | -4.5 | compare |
| nutrient | L-Serine | -4.8 | -5.2 | compare |
| carbon source | D-Gluconic Acid (C) | -4.7 | -6.4 | compare |
| nitrogen source | L-Proline (N) | -4.7 | -5.0 | compare |
| carbon source | L-Malic (C) | -4.7 | -4.6 | compare |
| carbon source | L-mannose (C) | -4.6 | -5.5 | compare |
| carbon source | m-Inositol (C) | -4.6 | -4.6 | compare |
| supernatant | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X | -4.6 | -5.2 | compare |
| nitrogen source | nitrate (N); high aeration | -4.5 | -5.4 | compare |