Fitness data for HSERO_RS20235 in Herbaspirillum seropedicae SmR1

cytochrome C
SEED: ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
KEGG: ubiquinol-cytochrome c reductase cytochrome c1 subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.1)


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group condition fitness t score  
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -3.2 -1.6 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -3.2 -1.6 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -3.1 -1.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -3.1 -1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -3.0 -1.0 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -3.0 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -2.8 -1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.8 -1.1 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -2.8 -1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -2.7 -1.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -2.7 -0.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -2.6 -1.3 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -2.4 -1.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -2.3 -1.4 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -2.3 -1.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.3 -1.1 compare
supernatant control Vogels_fungal_media; pH 5.5 -2.2 -1.4 compare
control NoPredeControl -2.2 -0.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -2.1 -1.3 compare
micoeukaryotes C.elegans, mixed culture-2 -2.1 -1.2 compare