Fitness data for HSERO_RS20205 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.7 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.3 +2.2 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.3 +2.4 compare
vitamin No vitamins t1 +0.3 +2.1 compare
carbon source L-Fucose (C) +0.3 +1.6 compare
vitamin With vitamins t2 +0.3 +1.8 compare
carbon source D-Gluconic Acid (C) +0.3 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.9 compare
carbon source D-Glucose (C) +0.4 +1.8 compare
vitamin No vitamins t2 +0.4 +2.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.4 +2.6 compare
carbon source L-Asparagine (C) +0.4 +2.5 compare
stress Fusidic 0.025 mg/ml +0.4 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.4 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.5 +3.1 compare
carbon source D-Glucose (C) +0.5 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.5 +4.0 compare
carbon source Xylitol (C) +0.5 +2.9 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.7 +4.5 compare