Fitness data for HSERO_RS20180 in Herbaspirillum seropedicae SmR1

type VI secretion protein
SEED: Uncharacterized protein ImpB
KEGG: type VI secretion system protein ImpB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Sisomicin 0.125 mg/ml -1.0 -3.6 compare
stress Lomefloxacin 0.012 mM -0.7 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.7 compare
carbon source D-Gluconic Acid (C) -0.5 -1.8 compare
stress Fusidic 0.025 mg/ml -0.5 -2.3 compare
carbon source m-Inositol (C) -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.4 compare
micoeukaryotes C.elegans, mixed culture-1 -0.3 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3 +1.6 compare
nutrient L-Histidine +0.3 +2.2 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.4 +2.4 compare
carbon source L-Asparagine (C) +0.4 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.4 +1.5 compare
carbon source L-Lactate (C) +0.4 +2.1 compare
nutrient L-Serine +0.4 +2.4 compare