Fitness data for HSERO_RS20140 in Herbaspirillum seropedicae SmR1

cell envelope biogenesis protein OmpA
SEED: Flagellar motor rotation protein MotB
KEGG: chemotaxis protein MotB; OmpA-OmpF porin, OOP family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.3 compare
stress Lomefloxacin 0.012 mM -0.5 -1.5 compare
r2a control R2A control -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.8 compare
carbon source L-Rhamnose (C) +0.4 +1.5 compare
carbon source L-Lactate (C) +0.4 +1.4 compare
carbon source L-Arabinose (C) +0.4 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4 +1.7 compare
carbon source Carbon source Phenylacetic 5 mM +0.4 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.3 compare
carbon source D-Glucose (C) +0.4 +1.9 compare
carbon source D-Ribose (C) +0.5 +2.2 compare
carbon source Carbon source Phenylacetic 5 mM +0.5 +2.9 compare
carbon source D-Ribose (C) +0.6 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +1.6 compare