Fitness data for HSERO_RS20105 in Herbaspirillum seropedicae SmR1

ABC transporter ATP-binding protein
SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
KEGG: simple sugar transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.9 -3.2 compare
carbon source D-Gluconic Acid (C) -0.6 -2.9 compare
carbon source L-Arabinose (C) -0.6 -3.1 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.8 compare
carbon source D-Sorbitol (C) -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.3 compare
carbon source L-Lactate (C) -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.1 compare
plant Control soil assay; outgrowth in LB +0.4 +1.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +3.1 compare