Fitness data for HSERO_RS20100 in Herbaspirillum seropedicae SmR1

ABC transporter permease
KEGG: simple sugar transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.0 compare
stress sodium fluoride 100 mM -0.3 -1.5 compare
control NoPredeControl -0.3 -1.4 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.3 +1.6 compare
carbon source Glycerol (C) +0.3 +1.0 compare
carbon source D-Glucose (C) +0.3 +1.3 compare
carbon source D-Galactose (C) +0.3 +1.6 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM +0.3 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.2 compare
carbon source succinate (C) +0.3 +1.7 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.4 +1.9 compare
carbon source D,L-Lactate (C) +0.4 +2.1 compare
carbon source L-Fucose (C) +0.4 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.4 +2.2 compare
carbon source L-Rhamnose (C) +0.4 +2.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +2.2 compare
stress Cisplatin 0.003 mg/ml +0.4 +1.7 compare
carbon source L-Fucose (C) +0.5 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +3.0 compare