Fitness data for HSERO_RS20035 in Herbaspirillum seropedicae SmR1

3-hydroxy-2-methylbutyryl-CoA dehydrogenase
SEED: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) @ 17hydroxysteroid dehydrogenase type 10 (HSD10)-like

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -4.3 -1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.1 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.7 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.5 -1.1 compare
carbon source D-Glucose (C) -1.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.5 compare
micoeukaryotes C.elegans, mixed culture-2 -1.2 -1.6 compare
carbon source L-Lactate (C) -1.1 -1.3 compare
carbon source L-Arabinose (C) -1.0 -1.1 compare
carbon source L-Fucose (C) -1.0 -2.0 compare
nitrogen source Ammonium chloride (N); high aeration -0.9 -1.9 compare
carbon source L-Proline (C) -0.9 -1.5 compare
control NoPredeControl -0.9 -1.4 compare
carbon source Xylitol (C) -0.9 -1.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -0.9 compare
stress sodium fluoride 100 mM +1.0 +1.7 compare
carbon source D-Glucose (C) +1.2 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.2 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +2.1 +2.7 compare