Fitness data for HSERO_RS20005 in Herbaspirillum seropedicae SmR1

IclR family transcriptional regulator
SEED: Pca regulon regulatory protein PcaR
KEGG: IclR family transcriptional regulator, pca regulon regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -3.3 compare
carbon source Xylitol (C) -0.9 -2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -2.4 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.8 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.4 compare
stress Chloride stress -0.7 -2.9 compare
nitrogen source L-Glutamic (N); high aeration -0.7 -3.0 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.7 -3.2 compare
stress nitrate 200 mM -0.7 -2.3 compare
carbon source D-Mannitol (C) -0.7 -2.2 compare
carbon source L-Rhamnose (C) -0.7 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.1 compare
carbon source m-Inositol (C) +0.6 +2.2 compare
carbon source L-Asparagine (C) +0.7 +3.2 compare
carbon source D-Galacturonic Acid (C) +0.8 +2.5 compare
carbon source pyruvate (C) +0.8 +3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +0.9 compare