Fitness data for HSERO_RS20000 in Herbaspirillum seropedicae SmR1

3-oxoadipate CoA-transferase subunit A
SEED: 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)
KEGG: 3-oxoadipate CoA-transferase, alpha subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
carbon source Xylitol (C) -0.7 -2.4 compare
carbon source D-Sorbitol (C) -0.6 -2.1 compare
stress Fusidic 0.025 mg/ml -0.6 -2.2 compare
stress Cobalt chloride 0.2 mM -0.5 -1.8 compare
nutrient L-Histidine -0.5 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.3 compare
nitrogen source L-Proline (N) -0.5 -1.7 compare
carbon source D-Galactose (C) -0.5 -1.8 compare
stress Dimethyl Sulfoxide 5 vol% -0.5 -2.0 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.5 -3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.3 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +2.6 compare
stress Lomefloxacin 0.012 mM +0.5 +1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.4 compare
carbon source L-Fucose (C) +0.5 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +1.1 compare