Fitness data for HSERO_RS19940 in Herbaspirillum seropedicae SmR1

ABC transporter substrate-binding protein
SEED: Benzoate transport, extracellular ligand-binding receptor
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)

group	condition	fitness	t score
carbon source	L-Lactate (C)	-1.1	-2.9	compare
carbon source	D-Galacturonic Acid (C)	-0.7	-1.9	compare
carbon source	L-Glutamine (C)	-0.7	-2.8	compare
carbon source	L-Fucose (C)	-0.6	-1.8	compare
carbon source	succinate (C)	-0.6	-1.7	compare
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-0.6	-1.5	compare
carbon source	D-Glucose-6-Phosphate (C)	-0.6	-2.1	compare
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6	+1.5	compare
nitrogen fixation control	L-Malic (C) with ammonium chloride; anaerobic; 3 days	+0.6	+3.2	compare
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6	+2.3	compare
stress	nitrate 200 mM	+0.6	+1.6	compare
carbon source	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM	+0.6	+3.1	compare
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	+0.6	+2.0	compare
carbon source	D-Mannose (C)	+0.7	+1.5	compare
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	+0.7	+2.2	compare
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.7	+1.3	compare
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days	+0.8	+2.9	compare
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.8	+1.1	compare
stress	Fusidic 0.025 mg/ml	+0.9	+2.6	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.7	+1.6	compare