Fitness data for HSERO_RS19915 in Herbaspirillum seropedicae SmR1

IclR family transcriptional regulator
SEED: Transcriptional regulator, IclR family
KEGG: IclR family transcriptional regulator, pca regulon regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.1 -3.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.4 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.7 -2.8 compare
carbon source D-Gluconic Acid (C) -0.6 -1.1 compare
carbon source Xylitol (C) -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.9 compare
carbon source L-Arabinose (C) +0.5 +1.7 compare
nitrogen source L-Proline (N) +0.5 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.4 compare
stress Sisomicin 0.125 mg/ml +0.5 +1.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.5 +2.7 compare
stress sodium fluoride 100 mM +0.5 +1.7 compare
stress Dimethyl Sulfoxide 5 vol% +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.7 compare
vitamin No vitamins t1 +0.6 +2.0 compare
carbon source L-Fucose (C) +0.6 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.7 +2.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.7 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.7 +1.4 compare