Fitness data for HSERO_RS19910 in Herbaspirillum seropedicae SmR1

AraC family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -1.6 compare
carbon source Glycerol (C) -1.0 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -1.0 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.6 compare
nutrient Min media with glucose -0.8 -2.4 compare
nitrogen source Ammonium chloride (N); high aeration +0.8 +1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +1.0 compare
carbon source D-Glucose (C) +0.8 +1.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.8 +2.4 compare
carbon source L-Malic (C) +0.8 +2.5 compare
carbon source D-Galactose (C) +0.8 +1.9 compare
plant Control soil assay; outgrowth in LB +0.9 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +1.2 compare
carbon source L-Fucose (C) +0.9 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 +1.1 compare