Fitness data for HSERO_RS19895 in Herbaspirillum seropedicae SmR1

AraC family transcriptional regulator
SEED: Uncharacterized protein ygiV
KEGG: AraC family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D,L-Lactate (C) -0.5 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.8 compare
plant Control soil assay; outgrowth in LB -0.4 -1.4 compare
stress A22 0.02 mg/ml -0.4 -2.0 compare
stress Lomefloxacin 0.012 mM -0.4 -1.3 compare
stress Cobalt chloride 0.2 mM -0.4 -1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.6 compare
stress sodium fluoride 100 mM -0.3 -2.1 compare
nitrogen source L-Proline (N) -0.3 -1.5 compare
carbon source L-Asparagine (C) -0.3 -2.0 compare
carbon source Glycerol (C) -0.3 -1.2 compare
stress Nickel (II) chloride 0.6 mM -0.3 -1.9 compare
carbon source L-Proline (C) -0.3 -1.2 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.3 +1.5 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.3 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.4 +2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +2.1 compare