Fitness data for HSERO_RS19765 in Herbaspirillum seropedicae SmR1

amino acid permease
SEED: Amino acid transporters

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.2 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.4 -1.5 compare
carbon source D-Mannitol (C) +0.4 +2.2 compare
nitrogen source Ammonium chloride (N); high aeration +0.4 +1.5 compare
carbon source D-Xylose (C) +0.4 +1.5 compare
control NoPredeControl +0.4 +1.3 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.3 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.5 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.5 +1.6 compare
carbon source D-Ribose (C) +0.5 +2.9 compare
carbon source D-Galactose (C) +0.5 +2.6 compare
carbon source D-Glucose (C) +0.5 +1.4 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +2.6 compare
carbon source D-Ribose (C) +0.5 +1.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.4 compare
carbon source D-Xylose (C) +0.7 +3.3 compare