Fitness data for HSERO_RS19545 in Herbaspirillum seropedicae SmR1

formamidopyrimidine-DNA glycosylase
SEED: Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
KEGG: formamidopyrimidine-DNA glycosylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.5 compare
carbon source L-Malic (C) -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.3 -1.2 compare
carbon source D-Glucose (C) -0.3 -1.9 compare
carbon source L-Proline (C) +0.3 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.0 compare
vitamin No vitamins t1 +0.4 +2.2 compare
carbon source D-Glucose (C) +0.4 +1.4 compare
carbon source Xylitol (C) +0.4 +1.5 compare
vitamin With vitamins t2 +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.4 compare
carbon source L-Fucose (C) +0.5 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.8 compare
carbon source D-Glucose (C) +0.6 +2.8 compare
carbon source L-Fucose (C) +0.6 +2.0 compare