Fitness data for HSERO_RS19465 in Herbaspirillum seropedicae SmR1

major facilitator transporter
SEED: Permeases of the major facilitator superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
supernatant control Vogels_fungal_media 0.1X -0.6 -3.3 compare
supernatant control Vogels_fungal_media 0.1X -0.5 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -2.5 compare
carbon source D-Ribose (C) -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.0 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.8 compare
carbon source D-Galactose (C) -0.4 -1.5 compare
carbon source D-Xylose (C) -0.4 -2.5 compare
carbon source L-Asparagine (C) +0.4 +2.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.4 +1.2 compare
stress Sisomicin 0.125 mg/ml +0.4 +1.4 compare
stress sodium fluoride 100 mM +0.4 +1.8 compare
carbon source D-Mannose (C) +0.4 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.4 compare
carbon source L-Proline (C) +0.5 +2.3 compare
stress nitrate 200 mM +0.5 +2.2 compare
nitrogen source L-Proline (N) +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.3 compare
stress nitrite 20 mM +0.6 +3.4 compare