Fitness data for HSERO_RS19455 in Herbaspirillum seropedicae SmR1

3-ketoacyl-ACP reductase
SEED: Oxidoreductase, short chain dehydrogenase/reductase family
KEGG: 3-oxoacyl-[acyl-carrier protein] reductase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.3 -1.0 compare
plant Control soil assay; outgrowth in LB -1.3 -1.8 compare
carbon source a-Ketoglutaric (C) -1.1 -1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -1.0 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.7 compare
supernatant control Vogels_fungal_media 0.1X -0.8 -1.6 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.8 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.7 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.7 -2.1 compare
carbon source L-Fucose (C) -0.7 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.3 compare
carbon source pyruvate (C) -0.6 -1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.1 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.8 +2.4 compare
carbon source D-Mannose (C) +0.8 +1.1 compare
carbon source L-Malic (C) +0.9 +1.8 compare
nitrogen source L-Proline (N) +0.9 +1.2 compare
stress Nickel (II) chloride 0.6 mM +1.0 +2.3 compare
stress Lomefloxacin 0.012 mM +1.1 +1.5 compare
stress Sisomicin 0.125 mg/ml +1.2 +1.6 compare