Fitness data for HSERO_RS19360 in Herbaspirillum seropedicae SmR1
2-keto-3-deoxyxylonate dehydratase (EC 4.2.1.141) (from data)
Original annotation: fumarylacetoacetate hydrolase
SEED: Fumarylacetoacetate hydrolase family protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)
Or see all 244 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | D-Xylose (C) | -4.3 | -12.7 | compare |
| carbon source | D-Xylose (C) | -4.3 | -11.5 | compare |
| carbon source | D-Xylose (C) | -4.1 | -8.3 | compare |
| carbon source | L-Fucose (C) | -1.0 | -3.0 | compare |
| carbon source | L-Rhamnose (C) | -0.9 | -5.4 | compare |
| carbon source | D-Mannose (C) | -0.6 | -2.9 | compare |
| carbon source | Xylitol (C) | -0.6 | -2.6 | compare |
| stress | Fusidic 0.025 mg/ml | -0.5 | -2.0 | compare |
| carbon source | D-Ribose (C) | -0.5 | -2.1 | compare |
| carbon source | D-Mannose (C) | -0.5 | -1.6 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | +0.5 | +1.6 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | +0.5 | +1.3 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | +0.5 | +1.7 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | +0.6 | +2.6 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | +0.6 | +1.7 | compare |
| carbon source | L-mannose (C) | +0.7 | +4.5 | compare |
| carbon source | L-mannose (C) | +0.7 | +4.4 | compare |
| plant | Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB | +0.7 | +1.3 | compare |
| carbon source | D-Glucose (C) | +1.1 | +6.2 | compare |
| carbon source | D-Glucose (C) | +1.1 | +6.3 | compare |