Fitness data for HSERO_RS19355 in Herbaspirillum seropedicae SmR1
galactarate dehydratase
SEED: Altronate dehydratase (EC 4.2.1.7)
KEGG: altronate hydrolase
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)
Or see all 244 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | D-Xylose (C) | -2.0 | -6.4 | compare |
| carbon source | D-Xylose (C) | -1.9 | -5.6 | compare |
| carbon source | L-Fucose (C) | -1.6 | -4.8 | compare |
| carbon source | D-Xylose (C) | -1.6 | -4.4 | compare |
| carbon source | L-Fucose (C) | -1.5 | -5.0 | compare |
| supernatant control | Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB | -0.5 | -2.0 | compare |
| carbon source | L-Rhamnose (C) | -0.5 | -1.8 | compare |
| carbon source | L-Rhamnose (C) | -0.4 | -1.6 | compare |
| carbon source | D-Galactose (C) | -0.4 | -1.9 | compare |
| stress | nitrite 20 mM | +0.4 | +2.2 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | +0.4 | +1.0 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | +0.4 | +1.2 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | +0.4 | +1.5 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI | +0.5 | +1.5 | compare |
| agar plate interaction | Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant | +0.5 | +1.4 | compare |
| vitamin | No vitamins t1 | +0.5 | +2.7 | compare |
| agar plate interaction control | Taped volatile agar plate with no fungus | +0.8 | +2.9 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | +0.8 | +2.0 | compare |
| carbon source | D-Ribose (C) | +2.2 | +5.9 | compare |
| carbon source | D-Ribose (C) | +2.5 | +5.9 | compare |