Fitness data for HSERO_RS19340 in Herbaspirillum seropedicae SmR1

amino acid ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: polar amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Rhamnose (C) -0.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.5 compare
stress Fusidic 0.025 mg/ml -0.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.2 compare
stress Cisplatin 0.003 mg/ml -0.5 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4 -3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.2 compare
carbon source D-Xylose (C) -0.4 -1.3 compare
carbon source L-Lactate (C) +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +0.8 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5 +3.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.5 +1.5 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.5 +3.1 compare
micoeukaryotes C.elegans, mixed culture-1 +0.6 +3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.0 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.7 +3.6 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.8 +5.5 compare
carbon source L-Fucose (C) +2.8 +20.7 compare
carbon source L-Fucose (C) +2.8 +19.4 compare