Fitness data for HSERO_RS19335 in Herbaspirillum seropedicae SmR1
ABC transporter permease
SEED: polar amino acid ABC transporter, inner membrane subunit
KEGG: polar amino acid transport system permease protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)
Or see all 244 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | D-Xylose (C) | -3.1 | -2.6 | compare |
| carbon source | D-Xylose (C) | -2.1 | -2.6 | compare |
| carbon source | D-Xylose (C) | -1.5 | -2.1 | compare |
| stress | nitrate 200 mM | -1.4 | -2.8 | compare |
| carbon source | L-Fucose (C) | -1.4 | -2.3 | compare |
| supernatant control | Vogels_fungal_media; pH 5.5 | -1.3 | -2.3 | compare |
| plant | Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB | -1.2 | -2.5 | compare |
| supernatant control | Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB | -1.2 | -1.5 | compare |
| carbon source | Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM | -1.1 | -3.7 | compare |
| plant | Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB | -1.1 | -2.3 | compare |
| carbon source | m-Inositol (C) | -1.1 | -2.8 | compare |
| stress | Sisomicin 0.125 mg/ml | -0.9 | -2.0 | compare |
| carbon source | D-Ribose (C) | +0.9 | +2.1 | compare |
| carbon source | D-Galactose (C) | +0.9 | +2.7 | compare |
| carbon source | Glycerol (C) | +1.0 | +2.2 | compare |
| carbon source | L-Rhamnose (C) | +1.1 | +2.1 | compare |
| agar plate interaction control | Taped volatile agar plate with no fungus | +1.1 | +1.9 | compare |
| carbon source | D-Ribose (C) | +1.5 | +2.9 | compare |
| carbon source | L-Fucose (C) | +2.2 | +6.9 | compare |
| carbon source | L-Fucose (C) | +2.5 | +6.5 | compare |