Fitness data for HSERO_RS19325 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Xylose (C) -5.6 -11.0 compare
carbon source D-Xylose (C) -4.9 -8.2 compare
carbon source D-Xylose (C) -4.7 -15.3 compare
carbon source L-Fucose (C) -2.1 -5.9 compare
carbon source L-Fucose (C) -1.9 -6.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -3.1 compare
carbon source L-Rhamnose (C) -0.6 -4.0 compare
carbon source L-Rhamnose (C) -0.6 -3.1 compare
carbon source L-Rhamnose (C) -0.6 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -3.2 compare
plant Control soil assay; outgrowth in LB -0.5 -2.4 compare
nitrogen source Ammonium chloride (N); low aeration -0.5 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.6 compare
carbon source D-Ribose (C) +1.0 +5.0 compare
carbon source D-Ribose (C) +1.2 +4.8 compare
carbon source L-Fucose (C) +2.2 +16.0 compare
carbon source L-Fucose (C) +2.2 +16.6 compare