Fitness data for HSERO_RS19165 in Herbaspirillum seropedicae SmR1

chemotaxis protein CheA
SEED: Signal transduction histidine kinase CheA (EC 2.7.3.-)
KEGG: type IV pili sensor histidine kinase and response regulator; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.9 compare
carbon source succinate (C) +0.3 +1.5 compare
carbon source D-Ribose (C) +0.3 +1.3 compare
carbon source L-Glutamine (C) +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.2 compare
carbon source D-Gluconic Acid (C) +0.3 +1.6 compare
carbon source D-Ribose (C) +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.0 compare
carbon source D-Xylose (C) +0.4 +2.1 compare
carbon source L-Rhamnose (C) +0.4 +1.7 compare
carbon source Xylitol (C) +0.4 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.3 compare
carbon source D-Glucose (C) +0.4 +2.0 compare
carbon source D-Glucose (C) +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.5 compare