Fitness data for HSERO_RS19060 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Predicted gluconate TRAP family transporter, DctM subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
micoeukaryotes C.elegans, mixed culture-1 -0.6 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.9 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.4 -1.0 compare
carbon source L-Fucose (C) -0.4 -2.2 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -1.3 compare
micoeukaryotes C.elegans, mixed culture-2 -0.4 -1.9 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -1.6 compare
control NoPredeControl +0.4 +1.4 compare
carbon source m-Inositol (C) +0.4 +1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.0 compare
stress Sisomicin 0.125 mg/ml +0.5 +1.9 compare
carbon source L-Rhamnose (C) +0.5 +2.1 compare
carbon source D-Lactate (C) +0.6 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +1.8 compare