Fitness data for HSERO_RS18950 in Herbaspirillum seropedicae SmR1

glycerol-3-phosphate transporter permease
SEED: Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3)
KEGG: sn-glycerol 3-phosphate transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Lactate (C) -0.8 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.3 compare
stress Lomefloxacin 0.012 mM -0.5 -1.5 compare
nitrogen source L-Glutamic (N); high aeration -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.9 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.5 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.9 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.4 -2.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.4 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.1 compare
stress sodium fluoride 100 mM +0.4 +1.3 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.5 +1.8 compare
carbon source L-Asparagine (C) +0.5 +2.1 compare
stress Cobalt chloride 0.2 mM +0.5 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +2.4 compare