Fitness data for HSERO_RS18940 in Herbaspirillum seropedicae SmR1

sn-glycerol-3-phosphate ABC transporter ATP-binding protein
SEED: Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3)
KEGG: sn-glycerol 3-phosphate transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.6 -3.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.6 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.4 -2.2 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.6 compare
carbon source D,L-Lactate (C) -0.3 -2.6 compare
carbon source Carbon source D-Glucose 20 mM -0.3 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
carbon source Carbon source Phenylacetic 5 mM -0.3 -2.0 compare
carbon source Carbon source Phenylacetic 5 mM -0.3 -1.9 compare
nutrient casaminos -0.3 -1.9 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.3 -2.0 compare
carbon source D-Glucose-6-Phosphate (C) -0.3 -1.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.5 compare
carbon source D-Glucose (C) +0.4 +1.5 compare
stress Cisplatin 0.003 mg/ml +0.4 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.3 compare