Fitness data for HSERO_RS18915 in Herbaspirillum seropedicae SmR1

AraC family transcriptional regulator
SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress Lomefloxacin 0.012 mM -0.8 -1.0 compare
stress Sisomicin 0.125 mg/ml -0.7 -1.2 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.6 -3.6 compare
carbon source D-Ribose (C) -0.6 -2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.8 compare
carbon source D-Galactose (C) -0.5 -1.8 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.4 -1.2 compare
carbon source D-Mannose (C) +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.7 compare
carbon source Carbon source D-Glucose 20 mM +0.5 +1.9 compare
nitrogen source L-Proline (N) +0.5 +1.1 compare
stress Fusidic 0.025 mg/ml +0.5 +2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +0.7 compare
micoeukaryotes C.elegans, mixed culture-2 +0.7 +3.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.7 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.1 +2.1 compare