Fitness data for HSERO_RS18895 in Herbaspirillum seropedicae SmR1

alkane 1-monooxygenase
SEED: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
KEGG: alkanal monooxygenase (FMN-linked)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.7 compare
carbon source D-Ribose (C) -0.8 -2.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.8 -2.8 compare
carbon source D-Gluconic Acid (C) -0.8 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7 -1.7 compare
supernatant control Vogels_fungal_media 0.1X -0.6 -1.8 compare
stress Lomefloxacin 0.012 mM -0.6 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.7 compare
supernatant control Vogels_fungal_media 0.1X -0.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.0 compare
carbon source pyruvate (C) -0.6 -1.5 compare
vitamin With vitamins t1 +0.6 +1.3 compare
carbon source D-Ribose (C) +0.7 +1.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.7 +3.1 compare
carbon source Glycerol (C) +0.7 +1.8 compare
stress Fusidic 0.025 mg/ml +0.7 +2.5 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.8 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +2.5 compare