Fitness data for HSERO_RS18595 in Herbaspirillum seropedicae SmR1

deoxyribodipyrimidine photo-lyase
SEED: photolyase protein family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.3 -2.1 compare
carbon source D-Glucose (C) -0.3 -1.4 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.3 -1.6 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.2 -1.6 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.2 -2.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.2 -1.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.2 +1.8 compare
carbon source D-Ribose (C) +0.3 +1.6 compare
carbon source D-Glucose (C) +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.8 compare
control NoPredeControl +0.3 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.4 compare
stress nitrate 200 mM +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +2.4 compare