Fitness data for HSERO_RS18565 in Herbaspirillum seropedicae SmR1

chemotaxis protein
SEED: Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.1 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -1.3 compare
stress Sisomicin 0.125 mg/ml -0.5 -1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.4 compare
carbon source Xylitol (C) -0.4 -1.2 compare
carbon source D-Glucose-6-Phosphate (C) -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.2 compare
carbon source D-Gluconic Acid (C) +0.3 +1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +0.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +1.8 compare
carbon source D-Ribose (C) +0.4 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +2.9 compare
vitamin No vitamins t1 +0.4 +2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.1 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.6 compare