Fitness data for HSERO_RS18505 in Herbaspirillum seropedicae SmR1

histidine ammonia-lyase
SEED: Putative histidine ammonia-lyase protein
KEGG: histidine ammonia-lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.7 -1.6 compare
carbon source L-Malic (C) -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.6 compare
carbon source D-Mannose (C) -0.5 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.8 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.4 -1.6 compare
vitamin No vitamins t1 -0.4 -1.7 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.4 -2.6 compare
carbon source L-Lactate (C) +0.4 +1.5 compare
carbon source L-Fucose (C) +0.4 +2.1 compare
carbon source m-Inositol (C) +0.4 +1.7 compare
carbon source L-Arabinose (C) +0.4 +2.3 compare
carbon source L-Fucose (C) +0.5 +1.7 compare
carbon source Glycerol (C) +0.5 +2.1 compare
carbon source D,L-Lactate (C) +0.5 +1.8 compare
carbon source D-Glucose-6-Phosphate (C) +0.5 +2.7 compare
carbon source D-Galacturonic Acid (C) +0.5 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.2 compare
stress Lomefloxacin 0.012 mM +0.7 +3.6 compare