Fitness data for HSERO_RS18320 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.5 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.9 -1.6 compare
vitamin No vitamins t2 -0.9 -2.1 compare
control NoPredeControl -0.8 -1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.8 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.3 compare
carbon source L-Arabinose (C) +0.8 +1.6 compare
carbon source m-Inositol (C) +0.8 +2.7 compare
carbon source L-Rhamnose (C) +0.9 +1.8 compare
carbon source L-Rhamnose (C) +0.9 +2.0 compare
carbon source Glycerol (C) +0.9 +2.8 compare
carbon source L-Fucose (C) +0.9 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +1.1 +2.6 compare
carbon source D-Galacturonic Acid (C) +1.1 +3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +1.2 +1.8 compare
carbon source D-Galactose (C) +1.2 +2.0 compare
carbon source D-Glucose (C) +1.2 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +2.1 +1.8 compare