Fitness data for HSERO_RS18310 in Herbaspirillum seropedicae SmR1

O-acetylhomoserine aminocarboxypropyltransferase
SEED: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
KEGG: O-acetylhomoserine (thiol)-lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.4 -2.6 compare
carbon source D-Gluconic Acid (C) -0.4 -2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.4 compare
micoeukaryotes C.elegans, mixed culture-2 -0.3 -1.5 compare
carbon source L-Fucose (C) -0.3 -1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.3 compare
stress A22 0.04 mg/ml -0.3 -1.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +0.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.3 +1.8 compare
carbon source L-Fucose (C) +0.3 +1.2 compare
carbon source L-Lactate (C) +0.3 +1.5 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.3 +1.9 compare
carbon source Carbon source D-Glucose 20 mM +0.3 +2.0 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.3 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.4 compare