Fitness data for HSERO_RS18265 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
plant Control soil assay; outgrowth in LB -1.9 -3.6 compare
carbon source L-Arabinose (C) -1.9 -3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -1.9 compare
carbon source pyruvate (C) -0.8 -2.7 compare
carbon source a-Ketoglutaric (C) -0.7 -2.0 compare
carbon source D-Galactose (C) -0.7 -1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +1.4 compare
stress Lomefloxacin 0.012 mM +0.7 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.7 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.9 compare
vitamin No vitamins t2 +0.7 +2.1 compare
carbon source D-Mannose (C) +0.8 +1.4 compare
stress Cisplatin 0.003 mg/ml +0.8 +2.4 compare
stress Nickel (II) chloride 0.6 mM +0.9 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +4.9 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.1 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.3 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +3.0 +1.8 compare