Fitness data for HSERO_RS18255 in Herbaspirillum seropedicae SmR1

branched-chain amino acid ABC transporter substrate-binding protein
SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source L-Arabinose (C) -1.4 -2.2 compare
carbon source pyruvate (C) -1.1 -2.5 compare
stress nitrate 200 mM -1.0 -1.9 compare
carbon source a-Ketoglutaric (C) -1.0 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.5 compare
carbon source L-Glutamine (C) -1.0 -2.4 compare
carbon source D-Sorbitol (C) -0.9 -2.2 compare
carbon source m-Inositol (C) -0.8 -1.9 compare
stress Sisomicin 0.125 mg/ml -0.8 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -1.9 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.8 +2.1 compare
vitamin With vitamins t1 +0.8 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.1 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.7 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.9 +2.2 compare
nitrogen source nitrate (N); low aeration +0.9 +2.2 compare
control NoPredeControl +1.0 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +1.0 +2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +1.0 +2.0 compare