Fitness data for HSERO_RS18145 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: probable membrane protein NMA1176

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress Sisomicin 0.125 mg/ml -2.1 -1.8 compare
stress Lomefloxacin 0.012 mM -1.7 -1.7 compare
carbon source L-Arabinose (C) -1.1 -1.6 compare
carbon source D-Gluconic Acid (C) -1.0 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.7 compare
plant Control soil assay; outgrowth in LB -0.8 -1.6 compare
carbon source D-Glucose-6-Phosphate (C) -0.7 -1.8 compare
carbon source D-Gluconic Acid (C) -0.7 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.7 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.5 compare
carbon source Xylitol (C) +0.7 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.8 +0.7 compare
carbon source D-Glucose (C) +0.8 +1.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.8 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.9 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +0.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.9 +3.6 compare