Fitness data for HSERO_RS17970 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.9 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.6 -2.8 compare
stress A22 0.04 mg/ml -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.4 -1.5 compare
nutrient L-Histidine -0.3 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -1.1 compare
carbon source D-Glucose (C) +0.4 +1.6 compare
carbon source D,L-Lactate (C) +0.4 +1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.1 compare
plant Control soil assay; outgrowth in LB +0.4 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4 +1.3 compare
carbon source D-Xylose (C) +0.4 +1.5 compare
carbon source Xylitol (C) +0.5 +1.4 compare
carbon source L-Arabinose (C) +0.6 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.8 compare