Fitness data for HSERO_RS17845 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: LysR-family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Glucose (C) -0.6 -1.8 compare
carbon source D-Glucose (C) -0.5 -1.5 compare
plant Control soil assay; outgrowth in LB -0.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.3 compare
carbon source D-Galacturonic Acid (C) -0.4 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.5 compare
carbon source pyruvate (C) -0.4 -1.6 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.4 -1.8 compare
carbon source D-Glucose-6-Phosphate (C) -0.4 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -1.7 compare
carbon source Carbon source D-Glucose 20 mM -0.4 -1.6 compare
carbon source L-Fucose (C) -0.3 -1.5 compare
stress nitrite 20 mM -0.3 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.2 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.4 +1.6 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.1 +2.4 compare