Fitness data for HSERO_RS17745 in Herbaspirillum seropedicae SmR1

hypothetical protein
SEED: ATPase component BioM of energizing module of biotin ECF transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source L-Arabinose (C) -0.4 -1.9 compare
carbon source Glycerol (C) -0.4 -1.9 compare
carbon source D-Sorbitol (C) -0.4 -2.4 compare
carbon source D-Lactate (C) -0.3 -1.6 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.3 -2.1 compare
carbon source m-Inositol (C) -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.3 +1.5 compare
carbon source D-Mannose (C) +0.3 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.7 compare
r2a control R2A control +0.3 +2.3 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.3 +1.3 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.4 +1.7 compare
control NoPredeControl +0.4 +2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.8 compare