Fitness data for HSERO_RS17670 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: Transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D,L-Lactate (C) -0.9 -4.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.8 -4.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.8 -3.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.6 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.6 -1.9 compare
carbon source D,L-Lactate (C) -0.5 -2.4 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.5 -2.4 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.5 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.9 compare
carbon source pyruvate (C) +0.4 +2.1 compare
carbon source D-Glucose (C) +0.4 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.3 compare
stress sodium fluoride 100 mM +0.5 +2.1 compare
carbon source D-Mannose (C) +0.6 +3.1 compare
stress Sisomicin 0.125 mg/ml +0.7 +2.1 compare
stress Lomefloxacin 0.012 mM +0.8 +3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +1.3 compare