Fitness data for HSERO_RS17645 in Herbaspirillum seropedicae SmR1

TonB-denpendent receptor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.4 -3.5 compare
carbon source L-Lactate (C) -0.4 -2.0 compare
carbon source L-Rhamnose (C) -0.3 -2.1 compare
stress Cobalt chloride 0.2 mM +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.2 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.4 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.1 +3.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.2 +3.3 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +1.4 +11.9 compare