Fitness data for HSERO_RS17635 in Herbaspirillum seropedicae SmR1

RNA polymerase sigma-70 factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.2 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -2.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.0 -2.5 compare
vitamin With vitamins t1 -0.9 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.6 -2.1 compare
vitamin With vitamins t2 -0.6 -1.8 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.6 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.2 compare
carbon source D-Glucose-6-Phosphate (C) +0.5 +2.1 compare
stress Nickel (II) chloride 0.6 mM +0.6 +2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.0 compare
stress Sisomicin 0.125 mg/ml +0.6 +1.4 compare
stress sodium fluoride 100 mM +0.7 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.1 +1.2 compare
stress Lomefloxacin 0.012 mM +1.1 +2.7 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +1.2 +4.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.4 +0.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +2.0 +2.2 compare