Fitness data for HSERO_RS17570 in Herbaspirillum seropedicae SmR1

4-carboxymuconolactone decarboxylase
SEED: Cation/multidrug efflux pump
KEGG: 4-carboxymuconolactone decarboxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
control NoPredeControl -5.1 -1.2 compare
vitamin With vitamins t1 -1.3 -1.8 compare
vitamin No vitamins t1 -1.2 -1.8 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.1 -0.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +1.0 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +1.1 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +1.1 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.2 +1.8 compare
carbon source L-Fucose (C) +1.2 +1.7 compare
carbon source D-Galacturonic Acid (C) +1.3 +1.9 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.4 +2.0 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.4 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.4 +2.0 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +1.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.5 +2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.9 +2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.0 +3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.0 +4.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.1 +4.2 compare