Fitness data for HSERO_RS17550 in Herbaspirillum seropedicae SmR1

amino acid ABC transporter substrate-binding protein
SEED: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
KEGG: glutamine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -3.6 compare
carbon source L-Proline (C) -0.6 -2.3 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.7 compare
stress nitrate 200 mM -0.5 -1.8 compare
nitrogen source L-Glutamic (N); high aeration -0.5 -2.2 compare
stress Fusidic 0.025 mg/ml -0.5 -1.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.5 -1.6 compare
r2a control R2A control -0.4 -2.0 compare
control NoPredeControl -0.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.4 -1.7 compare
carbon source L-Glutamine (C) -0.4 -1.5 compare
micoeukaryotes C.elegans, mixed culture-2 -0.4 -1.8 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -2.0 compare
carbon source D-Lactate (C) +0.4 +1.3 compare
carbon source D-Xylose (C) +0.4 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.5 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.2 compare