Fitness data for HSERO_RS17370 in Herbaspirillum seropedicae SmR1

hypothetical protein
SEED: Error-prone, lesion bypass DNA polymerase V (UmuC)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -3.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -2.2 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.0 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.4 -2.1 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.7 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.1 compare
nitrogen source L-Glutamic (N); low aeration +0.4 +2.2 compare
carbon source L-Rhamnose (C) +0.4 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.8 compare
plant Control soil assay; outgrowth in LB +0.5 +1.7 compare
control NoPredeControl +0.5 +1.8 compare
carbon source D-Glucose (C) +0.5 +2.1 compare
nitrogen source L-Glutamic (N); high aeration +0.5 +3.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +3.3 compare