Fitness data for HSERO_RS17145 in Herbaspirillum seropedicae SmR1

peptide ABC transporter substrate-binding protein
SEED: ABC transporter, periplasmic substrate-binding protein
KEGG: microcin C transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Ribose (C) -1.4 -5.1 compare
carbon source D-Ribose (C) -1.3 -4.4 compare
carbon source D-Galactose (C) -0.9 -4.3 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.9 -3.9 compare
carbon source m-Inositol (C) -0.8 -3.7 compare
carbon source D-Glucose-6-Phosphate (C) -0.8 -3.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -3.2 compare
carbon source L-Glutamine (C) -0.7 -2.9 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.7 -3.0 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.6 -4.8 compare
carbon source Xylitol (C) -0.6 -2.2 compare
carbon source D-Galactose (C) -0.6 -3.3 compare
carbon source succinate (C) -0.6 -3.1 compare
carbon source a-Ketoglutaric (C) -0.6 -2.6 compare
carbon source m-Inositol (C) -0.6 -2.7 compare
stress Sisomicin 0.125 mg/ml -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.9 compare
stress Nickel (II) chloride 0.6 mM +0.8 +3.6 compare