Fitness data for HSERO_RS17135 in Herbaspirillum seropedicae SmR1

peptide ABC transporter permease
SEED: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
KEGG: microcin C transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Ribose (C) -1.3 -5.2 compare
carbon source D-Ribose (C) -0.9 -3.6 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.9 -5.2 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.8 -4.8 compare
carbon source Xylitol (C) -0.8 -4.4 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.8 -4.4 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.7 -3.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.6 -4.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.4 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.6 -3.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -3.6 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.5 -3.1 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.5 -3.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -1.7 compare
carbon source D-Glucose-6-Phosphate (C) -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.0 compare
stress Nickel (II) chloride 0.6 mM +0.9 +3.9 compare