Fitness data for HSERO_RS17130 in Herbaspirillum seropedicae SmR1

ABC transporter
SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
KEGG: microcin C transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Ribose (C) -0.7 -3.6 compare
carbon source D-Ribose (C) -0.7 -2.9 compare
carbon source Xylitol (C) -0.6 -2.3 compare
carbon source D-Glucose (C) -0.6 -2.7 compare
carbon source Xylitol (C) -0.6 -2.4 compare
carbon source m-Inositol (C) -0.5 -2.5 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.5 -2.0 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.5 -2.9 compare
carbon source L-Arabinose (C) -0.5 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -2.6 compare
carbon source a-Ketoglutaric (C) -0.5 -1.7 compare
carbon source succinate (C) -0.4 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -2.4 compare
stress Sisomicin 0.125 mg/ml +0.5 +1.9 compare
carbon source Carbon source Phenylacetic 5 mM +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.3 compare
carbon source Carbon source Phenylacetic 5 mM +0.6 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +2.9 compare
stress Nickel (II) chloride 0.6 mM +0.7 +4.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.7 compare