Fitness data for HSERO_RS17110 in Herbaspirillum seropedicae SmR1

ribonuclease H
SEED: Ribonuclease HI (EC 3.1.26.4)
KEGG: ribonuclease HI

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 5.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -7.1 -3.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -7.0 -3.1 compare
carbon source L-Asparagine (C) -7.0 -4.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -6.9 -3.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -6.9 -3.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -6.9 -3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -6.9 -3.5 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -6.8 -3.4 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -6.8 -4.2 compare
agar plate interaction control Taped volatile agar plate with no fungus -6.8 -2.8 compare
stress nitrate 200 mM -6.6 -4.0 compare
stress Sisomicin 0.125 mg/ml -6.3 -3.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -6.2 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -6.1 -3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -5.9 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -5.9 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -5.6 -2.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -5.6 -3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -5.6 -3.3 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -5.4 -3.0 compare